Showing posts with label repertoire diversity. Show all posts
Showing posts with label repertoire diversity. Show all posts

Tuesday, March 7, 2017

Minimal threshold for Treg repertoire diversity that prevents autoimmunity

If you have read enough of my blog you most likely noticed the preference for research articles that provide some new insight into Tregs' biology.

Few weeks back I analyzed new paper from Rudensky's lab that showed that 50% of mouse with Tregs expressing single TCR specificity were protected from lethal autoimmunity, though not from non-lethal or less lethal forms of  tissue autoimmunity. 

So what is the minimal Tregs TCRβ repertoire diversity required to suppress autoreactive T cells that escape thymic selection?

New paper from Thomas Malek's lab tried to found it out by serially transferring WT Tregs into Treg-deficient IL-2RβKO mice (1st and 2nd level recipients) and analyzing TCR repertoire pre and post transfer. They observed that after each transfer into IL-2RβKO Tregs TCR repertoire diversity got narrower and when it fell < 7000 unique Treg clonal specificity mice showed autoimmunity.


This threshold also correlated with pathological increase in CD62LlowCD44hi population that represents activated T cells typical to autoimmunity.



In summary, this study indicates that there is a minimal threshold for Tregs repertoire diversity that is essential to prevent non-lethal forms of autoimmunity.

David Usharauli
        

Tuesday, July 7, 2015

Gut-associated IgA repertoire diversity is maintained independently of continuous gut flora exposure

Gut-associated immune system has a delicate task to maintain tolerance towards endogenous gut flora and food-associated antigens while at the same time to detect and mount protective immune response against invading pathogens.

Clonal size and repertoire diversity of gut-associated IgA pool are influenced by presence of flora antigens. However, little is known of the mechanisms that control gut IgA repertoire stability in response to antibiotic treatment or pathogen exposure.


Initially, the authors showed that IgA repertoire diversity in germ-free mice exposed to various combination of flora (mono or poly-colonization) correlated with richness of colonized flora.


However, when GF mouse gut IgA pool was analyzed, before and after flora exposure, the authors noticed no major IgA repertoire change, implying flora-independent IgA repertoire maintenance (through it is not quite clear here how the authors differentiate IgA repertoire "diversity" versus repertoire "similarity").


Interestingly, the authors made similar observation in gut IgA pool from healthy volunteers exposed to antibiotics.

In addition, the article contains several other experiments, but I was not able to decipher their meaning or relevance to the concept, so I did not discuss them here. In general, paper is poorly written and lacks natural flow between experimental hypothesis and experimental results.

In summary, my interpretation of this paper is following: (a) gut IgA repertoire diversity is non-overlapping between individuals, including genetically identical mice, (b) gut IgA repertoire stability is minimally influenced by exposure to antibiotics or new flora (however if it is true and gut immune system maintains its integrity upon antibiotic exposure, then how can we account for frequent GI issues following antibiotic treatments?)

David Usharauli